Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.13■□□□□ 0.17
Prdm4Q80V63 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Gm18959-201ENSMUST00000208954 655 ntBASIC16.12■□□□□ 0.17
Prdm4Q80V63 Gm18115-201ENSMUST00000221209 621 ntBASIC16.12■□□□□ 0.17
Prdm4Q80V63 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.12■□□□□ 0.17
Prdm4Q80V63 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prdm4Q80V63 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Gm13186-201ENSMUST00000118031 316 ntBASIC16.11■□□□□ 0.17
Prdm4Q80V63 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.11■□□□□ 0.17
Prdm4Q80V63 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Gm10819-201ENSMUST00000099988 561 ntBASIC16.11■□□□□ 0.17
Prdm4Q80V63 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prdm4Q80V63 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.1■□□□□ 0.17
Prdm4Q80V63 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.1■□□□□ 0.17
Prdm4Q80V63 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.1■□□□□ 0.17
Prdm4Q80V63 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prdm4Q80V63 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prdm4Q80V63 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Mir5130-201ENSMUST00000175160 84 ntBASIC16.09■□□□□ 0.17
Prdm4Q80V63 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prdm4Q80V63 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms