Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vma21Q78T54 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Gm5587-201ENSMUST00000206270 674 ntBASIC12.6□□□□□ -0.39
Vma21Q78T54 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vma21Q78T54 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vma21Q78T54 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.59□□□□□ -0.39
Vma21Q78T54 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.59□□□□□ -0.39
Vma21Q78T54 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.59□□□□□ -0.39
Vma21Q78T54 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Gm45328-201ENSMUST00000210942 917 ntBASIC12.59□□□□□ -0.39
Vma21Q78T54 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.59□□□□□ -0.39
Vma21Q78T54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.59□□□□□ -0.39
Vma21Q78T54 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.59□□□□□ -0.39
Vma21Q78T54 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vma21Q78T54 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vma21Q78T54 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vma21Q78T54 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Gm11950-201ENSMUST00000121615 838 ntBASIC12.58□□□□□ -0.4
Vma21Q78T54 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.58□□□□□ -0.4
Vma21Q78T54 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vma21Q78T54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms