Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rif1Q6PR54 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 Asic1-205ENSMUST00000228185 1818 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Gm12134-201ENSMUST00000122109 520 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 Gm17420-201ENSMUST00000164753 153 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Shd-206ENSMUST00000225145 998 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Gm4875-201ENSMUST00000118257 786 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.99□□□□□ -0.33
Rif1Q6PR54 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rif1Q6PR54 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.98□□□□□ -0.33
Rif1Q6PR54 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.98□□□□□ -0.33
Rif1Q6PR54 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm2272-201ENSMUST00000194903 582 ntBASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Gm18624-201ENSMUST00000220966 658 ntBASIC12.98□□□□□ -0.33
Rif1Q6PR54 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rif1Q6PR54 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm12008-201ENSMUST00000117791 755 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm7775-201ENSMUST00000218871 853 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms