Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Gm715-201ENSMUST00000117865 831 ntBASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Gm3375-201ENSMUST00000203929 796 ntBASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf220Q6PDX6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf220Q6PDX6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Gm21814-202ENSMUST00000203277 873 ntBASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf220Q6PDX6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms