Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.78■□□□□ 0.6
Ptpdc1Q6NZK8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ptpdc1Q6NZK8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpdc1Q6NZK8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpdc1Q6NZK8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpdc1Q6NZK8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpdc1Q6NZK8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpdc1Q6NZK8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpdc1Q6NZK8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Gm11452-201ENSMUST00000122376 690 ntBASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpdc1Q6NZK8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpdc1Q6NZK8 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpdc1Q6NZK8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms