Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.71■□□□□ 0.11
Sp140Q6NSQ5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Sp140Q6NSQ5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sp140Q6NSQ5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Gm12644-201ENSMUST00000119935 606 ntBASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Gm18669-201ENSMUST00000216049 778 ntBASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sp140Q6NSQ5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Gm19164-201ENSMUST00000210667 640 ntBASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp140Q6NSQ5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gm8097-201ENSMUST00000117903 829 ntBASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sp140Q6NSQ5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms