Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.44□□□□□ -0.58
Ss18Q62280 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.44□□□□□ -0.58
Ss18Q62280 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ss18Q62280 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ss18Q62280 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.43□□□□□ -0.58
Ss18Q62280 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ss18Q62280 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ss18Q62280 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Gm9013-201ENSMUST00000132939 882 ntBASIC11.43□□□□□ -0.58
Ss18Q62280 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.43□□□□□ -0.58
Ss18Q62280 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.43□□□□□ -0.58
Ss18Q62280 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ss18Q62280 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Ss18Q62280 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.43□□□□□ -0.58
Ss18Q62280 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ss18Q62280 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ss18Q62280 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ss18Q62280 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ss18Q62280 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ss18Q62280 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Mir770-201ENSMUST00000103252 94 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.42□□□□□ -0.58
Ss18Q62280 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.42□□□□□ -0.58
Ss18Q62280 Gm10231-201ENSMUST00000181584 441 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Gm10175-202ENSMUST00000208752 441 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Gm18032-201ENSMUST00000222541 538 ntBASIC11.42□□□□□ -0.58
Ss18Q62280 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ss18Q62280 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ss18Q62280 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ss18Q62280 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.42□□□□□ -0.58
Ss18Q62280 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ss18Q62280 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ss18Q62280 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ss18Q62280 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ss18Q62280 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms