Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Six2Q62232 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.46■□□□□ 0.23
Six2Q62232 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.46■□□□□ 0.23
Six2Q62232 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Six2Q62232 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.46■□□□□ 0.23
Six2Q62232 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Gm10819-201ENSMUST00000099988 561 ntBASIC16.46■□□□□ 0.23
Six2Q62232 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.46■□□□□ 0.23
Six2Q62232 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six2Q62232 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Six2Q62232 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Six2Q62232 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Six2Q62232 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six2Q62232 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six2Q62232 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Six2Q62232 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six2Q62232 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.44■□□□□ 0.22
Six2Q62232 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.44■□□□□ 0.22
Six2Q62232 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.44■□□□□ 0.22
Six2Q62232 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.44■□□□□ 0.22
Six2Q62232 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Six2Q62232 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six2Q62232 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six2Q62232 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.43■□□□□ 0.22
Six2Q62232 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.43■□□□□ 0.22
Six2Q62232 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.43■□□□□ 0.22
Six2Q62232 Gm43347-201ENSMUST00000200226 580 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms