Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ift88Q61371 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.12■□□□□ 0.33
Ift88Q61371 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.12■□□□□ 0.33
Ift88Q61371 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ift88Q61371 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ift88Q61371 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.11■□□□□ 0.33
Ift88Q61371 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ift88Q61371 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm8825-201ENSMUST00000182565 998 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm4518-201ENSMUST00000182638 718 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm29518-201ENSMUST00000190858 372 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.11■□□□□ 0.33
Ift88Q61371 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Ift88Q61371 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.11■□□□□ 0.33
Ift88Q61371 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ift88Q61371 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ift88Q61371 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.1■□□□□ 0.33
Ift88Q61371 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.1■□□□□ 0.33
Ift88Q61371 Gm25016-201ENSMUST00000158399 131 ntBASIC17.1■□□□□ 0.33
Ift88Q61371 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ift88Q61371 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ift88Q61371 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ift88Q61371 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ift88Q61371 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ift88Q61371 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.09■□□□□ 0.33
Ift88Q61371 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ift88Q61371 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms