Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Irf9Q61179 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.17■□□□□ 0.66
Irf9Q61179 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Irf9Q61179 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Irf9Q61179 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Irf9Q61179 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.17■□□□□ 0.66
Irf9Q61179 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.17■□□□□ 0.66
Irf9Q61179 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Irf9Q61179 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf9Q61179 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
Irf9Q61179 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.16■□□□□ 0.66
Irf9Q61179 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.16■□□□□ 0.66
Irf9Q61179 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Irf9Q61179 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Irf9Q61179 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf9Q61179 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Irf9Q61179 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Irf9Q61179 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Irf9Q61179 Gm16198-201ENSMUST00000118766 670 ntBASIC19.15■□□□□ 0.66
Irf9Q61179 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.15■□□□□ 0.66
Irf9Q61179 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.15■□□□□ 0.66
Irf9Q61179 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.15■□□□□ 0.66
Irf9Q61179 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Irf9Q61179 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Irf9Q61179 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf9Q61179 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.14■□□□□ 0.65
Irf9Q61179 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm26308-201ENSMUST00000157768 69 ntBASIC19.14■□□□□ 0.65
Irf9Q61179 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.14■□□□□ 0.65
Irf9Q61179 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.14■□□□□ 0.65
Irf9Q61179 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Irf9Q61179 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Irf9Q61179 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.13■□□□□ 0.65
Irf9Q61179 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Irf9Q61179 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Gm9385-201ENSMUST00000117563 472 ntBASIC19.13■□□□□ 0.65
Irf9Q61179 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.13■□□□□ 0.65
Irf9Q61179 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.13■□□□□ 0.65
Irf9Q61179 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.13■□□□□ 0.65
Irf9Q61179 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms