Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Gm27300-201ENSMUST00000184085 97 ntBASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Gm27335-201ENSMUST00000184758 97 ntBASIC16.44■□□□□ 0.22
Shroom1Q5SX79 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.43■□□□□ 0.22
Shroom1Q5SX79 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom1Q5SX79 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Gm9682-201ENSMUST00000197505 556 ntBASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Gm7787-201ENSMUST00000216858 688 ntBASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom1Q5SX79 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.41■□□□□ 0.22
Shroom1Q5SX79 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom1Q5SX79 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms