Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-1Q5R1I8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-1Q5R1I8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-1Q5R1I8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms