Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-4Q5R1I0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Gm15467-201ENSMUST00000120582 445 ntBASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 App-207ENSMUST00000227737 2827 ntBASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-4Q5R1I0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm27300-201ENSMUST00000184085 97 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm27335-201ENSMUST00000184758 97 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm5264-201ENSMUST00000190584 848 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-4Q5R1I0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-4Q5R1I0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Gm8318-201ENSMUST00000182954 872 ntBASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-4Q5R1I0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms