Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm42569-201ENSMUST00000200539 472 ntBASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7d-4Q5R1H9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Gm27405-201ENSMUST00000184201 112 ntBASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Gm8495-201ENSMUST00000188740 694 ntBASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7d-4Q5R1H9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms