Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-2Q5R1B6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm7488-201ENSMUST00000117148 684 ntBASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm14127-201ENSMUST00000117906 678 ntBASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-2Q5R1B6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Gm14767-201ENSMUST00000121559 586 ntBASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-2Q5R1B6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms