Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Rpph1-201ENSMUST00000175096 319 ntBASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm18246-201ENSMUST00000221023 728 ntBASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf43Q5NCP0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Gm20949-201ENSMUST00000206478 952 ntBASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Gm5186-201ENSMUST00000218781 920 ntBASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf43Q5NCP0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf43Q5NCP0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Gm25948-201ENSMUST00000175334 112 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms