Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.3■□□□□ 0.04
Scn2bQ56A07 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.29■□□□□ 0.04
Scn2bQ56A07 Gm27357-201ENSMUST00000183754 135 ntBASIC15.29■□□□□ 0.04
Scn2bQ56A07 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2bQ56A07 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.28■□□□□ 0.04
Scn2bQ56A07 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2bQ56A07 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.27■□□□□ 0.04
Scn2bQ56A07 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Gm25406-201ENSMUST00000157599 105 ntBASIC15.27■□□□□ 0.04
Scn2bQ56A07 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.27■□□□□ 0.04
Scn2bQ56A07 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn2bQ56A07 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn2bQ56A07 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.26■□□□□ 0.03
Scn2bQ56A07 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms