Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Gm6550-201ENSMUST00000187574 993 ntBASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm29609Q3UU56 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm29609Q3UU56 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Gm13036-201ENSMUST00000117799 748 ntBASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm29609Q3UU56 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.21■□□□□ 0.19
Gm29609Q3UU56 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm29609Q3UU56 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gm13616-201ENSMUST00000120600 222 ntBASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Mir8117-201ENSMUST00000184773 107 ntBASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gm8396-201ENSMUST00000057361 823 ntBASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm29609Q3UU56 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms