Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.16■□□□□ 0.5
Col5a2Q3U962 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Col5a2Q3U962 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col5a2Q3U962 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Asic1-205ENSMUST00000228185 1818 ntBASIC18.15■□□□□ 0.5
Col5a2Q3U962 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Gm12138-201ENSMUST00000122180 951 ntBASIC18.15■□□□□ 0.5
Col5a2Q3U962 Gm43703-201ENSMUST00000200523 763 ntBASIC18.15■□□□□ 0.5
Col5a2Q3U962 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Gm6218-201ENSMUST00000219812 628 ntBASIC18.15■□□□□ 0.5
Col5a2Q3U962 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col5a2Q3U962 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Gm14042-201ENSMUST00000120139 833 ntBASIC18.14■□□□□ 0.5
Col5a2Q3U962 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.14■□□□□ 0.5
Col5a2Q3U962 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.14■□□□□ 0.5
Col5a2Q3U962 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Col5a2Q3U962 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.14■□□□□ 0.49
Col5a2Q3U962 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.14■□□□□ 0.49
Col5a2Q3U962 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col5a2Q3U962 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.13■□□□□ 0.49
Col5a2Q3U962 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.13■□□□□ 0.49
Col5a2Q3U962 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.13■□□□□ 0.49
Col5a2Q3U962 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.13■□□□□ 0.49
Col5a2Q3U962 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.13■□□□□ 0.49
Col5a2Q3U962 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col5a2Q3U962 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms