Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mmp25Q3U435 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp25Q3U435 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.52□□□□□ -0.09
Mmp25Q3U435 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp25Q3U435 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.51□□□□□ -0.09
Mmp25Q3U435 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gm6443-201ENSMUST00000203599 874 ntBASIC14.51□□□□□ -0.09
Mmp25Q3U435 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.51□□□□□ -0.09
Mmp25Q3U435 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.5□□□□□ -0.09
Mmp25Q3U435 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.5□□□□□ -0.09
Mmp25Q3U435 Gm18206-201ENSMUST00000207027 926 ntBASIC14.5□□□□□ -0.09
Mmp25Q3U435 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp25Q3U435 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms