Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf4Q06507 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Atf4Q06507 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Atf4Q06507 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Atf4Q06507 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf4Q06507 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf4Q06507 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Atf4Q06507 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf4Q06507 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.71□□□□□ -0.05
Atf4Q06507 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Atf4Q06507 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Atf4Q06507 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf4Q06507 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Atf4Q06507 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.7□□□□□ -0.06
Atf4Q06507 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.7□□□□□ -0.06
Atf4Q06507 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Atf4Q06507 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.7□□□□□ -0.06
Atf4Q06507 Mir8117-201ENSMUST00000184773 107 ntBASIC14.7□□□□□ -0.06
Atf4Q06507 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.7□□□□□ -0.06
Atf4Q06507 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.7□□□□□ -0.06
Atf4Q06507 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Atf4Q06507 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf4Q06507 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.69□□□□□ -0.06
Atf4Q06507 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Atf4Q06507 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Atf4Q06507 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm4459-201ENSMUST00000118750 468 ntBASIC14.69□□□□□ -0.06
Atf4Q06507 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.69□□□□□ -0.06
Atf4Q06507 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm28975-201ENSMUST00000186412 686 ntBASIC14.69□□□□□ -0.06
Atf4Q06507 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.69□□□□□ -0.06
Atf4Q06507 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Atf4Q06507 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.69□□□□□ -0.06
Atf4Q06507 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf4Q06507 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Atf4Q06507 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Atf4Q06507 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Gm13263-201ENSMUST00000121271 838 ntBASIC14.68□□□□□ -0.06
Atf4Q06507 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.68□□□□□ -0.06
Atf4Q06507 Mir3113-201ENSMUST00000175478 76 ntBASIC14.68□□□□□ -0.06
Atf4Q06507 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.68□□□□□ -0.06
Atf4Q06507 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms