Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Gm18889-201ENSMUST00000174284 929 ntBASIC16.31■□□□□ 0.2
Smpd1Q04519 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.31■□□□□ 0.2
Smpd1Q04519 Gm43553-201ENSMUST00000200900 685 ntBASIC16.31■□□□□ 0.2
Smpd1Q04519 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.31■□□□□ 0.2
Smpd1Q04519 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smpd1Q04519 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smpd1Q04519 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Gm13616-201ENSMUST00000120600 222 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Mir6956-201ENSMUST00000183598 62 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 Mir6990-201ENSMUST00000183724 91 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Gm43474-201ENSMUST00000196415 774 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 Gm5312-201ENSMUST00000203728 547 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.3■□□□□ 0.2
Smpd1Q04519 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smpd1Q04519 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.3■□□□□ 0.2
Smpd1Q04519 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smpd1Q04519 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.29■□□□□ 0.2
Smpd1Q04519 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smpd1Q04519 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smpd1Q04519 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC16.29■□□□□ 0.2
Smpd1Q04519 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.29■□□□□ 0.2
Smpd1Q04519 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm2272-201ENSMUST00000194903 582 ntBASIC16.29■□□□□ 0.2
Smpd1Q04519 Thoc7-209ENSMUST00000225325 765 ntBASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smpd1Q04519 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.28■□□□□ 0.2
Smpd1Q04519 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.28■□□□□ 0.2
Smpd1Q04519 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.28■□□□□ 0.2
Smpd1Q04519 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.28■□□□□ 0.2
Smpd1Q04519 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.28■□□□□ 0.2
Smpd1Q04519 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smpd1Q04519 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms