Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smn1P97801 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smn1P97801 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smn1P97801 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Smn1P97801 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smn1P97801 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smn1P97801 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.27□□□□□ -0.29
Smn1P97801 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Smn1P97801 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.27□□□□□ -0.29
Smn1P97801 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smn1P97801 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.27□□□□□ -0.29
Smn1P97801 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smn1P97801 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smn1P97801 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.27□□□□□ -0.29
Smn1P97801 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.27□□□□□ -0.29
Smn1P97801 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smn1P97801 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.26□□□□□ -0.29
Smn1P97801 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.26□□□□□ -0.29
Smn1P97801 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.26□□□□□ -0.29
Smn1P97801 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.26□□□□□ -0.29
Smn1P97801 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Gm21559-201ENSMUST00000220638 855 ntBASIC13.26□□□□□ -0.29
Smn1P97801 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Smn1P97801 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Gm8587-201ENSMUST00000076538 843 ntBASIC13.26□□□□□ -0.29
Smn1P97801 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.26□□□□□ -0.29
Smn1P97801 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smn1P97801 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smn1P97801 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Smn1P97801 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.25□□□□□ -0.29
Smn1P97801 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.25□□□□□ -0.29
Smn1P97801 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.25□□□□□ -0.29
Smn1P97801 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Smn1P97801 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Efs-202ENSMUST00000227037 2540 ntBASIC13.25□□□□□ -0.29
Smn1P97801 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smn1P97801 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smn1P97801 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Smn1P97801 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms