Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lig3P97386 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lig3P97386 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.87■□□□□ 0.29
Lig3P97386 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lig3P97386 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lig3P97386 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lig3P97386 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Gm13036-201ENSMUST00000117799 748 ntBASIC16.86■□□□□ 0.29
Lig3P97386 Gm8097-201ENSMUST00000117903 829 ntBASIC16.86■□□□□ 0.29
Lig3P97386 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lig3P97386 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.86■□□□□ 0.29
Lig3P97386 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lig3P97386 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lig3P97386 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Lig3P97386 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lig3P97386 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lig3P97386 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.85■□□□□ 0.29
Lig3P97386 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Gm7506-201ENSMUST00000207758 815 ntBASIC16.85■□□□□ 0.29
Lig3P97386 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.85■□□□□ 0.29
Lig3P97386 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.85■□□□□ 0.29
Lig3P97386 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Gm10175-201ENSMUST00000086013 645 ntBASIC16.85■□□□□ 0.29
Lig3P97386 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lig3P97386 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.85■□□□□ 0.29
Lig3P97386 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lig3P97386 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.85■□□□□ 0.29
Lig3P97386 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lig3P97386 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lig3P97386 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.84■□□□□ 0.29
Lig3P97386 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.84■□□□□ 0.29
Lig3P97386 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.84■□□□□ 0.29
Lig3P97386 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.84■□□□□ 0.29
Lig3P97386 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.84■□□□□ 0.29
Lig3P97386 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lig3P97386 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lig3P97386 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Lig3P97386 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.84■□□□□ 0.29
Lig3P97386 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
Lig3P97386 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lig3P97386 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lig3P97386 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lig3P97386 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lig3P97386 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Lig3P97386 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Lig3P97386 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lig3P97386 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.83■□□□□ 0.28
Lig3P97386 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.83■□□□□ 0.28
Lig3P97386 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Lig3P97386 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lig3P97386 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.83■□□□□ 0.28
Lig3P97386 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lig3P97386 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lig3P97386 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lig3P97386 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms