Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm10175-202ENSMUST00000208752 441 ntBASIC15.34■□□□□ 0.05
Crnkl1P63154 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Crnkl1P63154 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.34■□□□□ 0.05
Crnkl1P63154 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Crnkl1P63154 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Crnkl1P63154 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crnkl1P63154 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.33■□□□□ 0.05
Crnkl1P63154 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.33■□□□□ 0.04
Crnkl1P63154 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.33■□□□□ 0.04
Crnkl1P63154 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Crnkl1P63154 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crnkl1P63154 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Crnkl1P63154 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Crnkl1P63154 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Crnkl1P63154 Actl10-202ENSMUST00000226583 1501 ntBASIC15.32■□□□□ 0.04
Crnkl1P63154 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crnkl1P63154 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.31■□□□□ 0.04
Crnkl1P63154 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Crnkl1P63154 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.31■□□□□ 0.04
Crnkl1P63154 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Crnkl1P63154 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms