Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ybx1P62960 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ybx1P62960 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ybx1P62960 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Ybx1P62960 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.8■□□□□ 0.12
Ybx1P62960 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.8■□□□□ 0.12
Ybx1P62960 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.8■□□□□ 0.12
Ybx1P62960 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.8■□□□□ 0.12
Ybx1P62960 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ybx1P62960 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.79■□□□□ 0.12
Ybx1P62960 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Ybx1P62960 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ybx1P62960 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.79■□□□□ 0.12
Ybx1P62960 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.79■□□□□ 0.12
Ybx1P62960 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.79■□□□□ 0.12
Ybx1P62960 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.79■□□□□ 0.12
Ybx1P62960 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.79■□□□□ 0.12
Ybx1P62960 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ybx1P62960 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Ybx1P62960 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.78■□□□□ 0.12
Ybx1P62960 Mir6990-201ENSMUST00000183724 91 ntBASIC15.78■□□□□ 0.12
Ybx1P62960 Gm43474-201ENSMUST00000196415 774 ntBASIC15.78■□□□□ 0.12
Ybx1P62960 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.78■□□□□ 0.12
Ybx1P62960 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.78■□□□□ 0.12
Ybx1P62960 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ybx1P62960 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ybx1P62960 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ybx1P62960 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ybx1P62960 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.77■□□□□ 0.12
Ybx1P62960 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Ybx1P62960 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.77■□□□□ 0.12
Ybx1P62960 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.77■□□□□ 0.12
Ybx1P62960 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms