Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ube2d3P61079 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ube2d3P61079 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Gm10231-201ENSMUST00000181584 441 ntBASIC11.08□□□□□ -0.64
Ube2d3P61079 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Gm10175-202ENSMUST00000208752 441 ntBASIC11.08□□□□□ -0.64
Ube2d3P61079 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Ube2d3P61079 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.08□□□□□ -0.64
Ube2d3P61079 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube2d3P61079 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube2d3P61079 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.07□□□□□ -0.64
Ube2d3P61079 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Ube2d3P61079 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms