Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.5■□□□□ 0.71
Msh6P54276 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Msh6P54276 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.5■□□□□ 0.71
Msh6P54276 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.5■□□□□ 0.71
Msh6P54276 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh6P54276 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh6P54276 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.5■□□□□ 0.71
Msh6P54276 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.5■□□□□ 0.71
Msh6P54276 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Msh6P54276 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.49■□□□□ 0.71
Msh6P54276 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.49■□□□□ 0.71
Msh6P54276 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.49■□□□□ 0.71
Msh6P54276 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh6P54276 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.49■□□□□ 0.71
Msh6P54276 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Msh6P54276 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.48■□□□□ 0.71
Msh6P54276 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Msh6P54276 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Msh6P54276 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.48■□□□□ 0.71
Msh6P54276 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.48■□□□□ 0.71
Msh6P54276 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.48■□□□□ 0.71
Msh6P54276 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.48■□□□□ 0.71
Msh6P54276 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh6P54276 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Msh6P54276 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Msh6P54276 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.47■□□□□ 0.71
Msh6P54276 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Msh6P54276 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh6P54276 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Gm2272-201ENSMUST00000194903 582 ntBASIC19.47■□□□□ 0.71
Msh6P54276 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Msh6P54276 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh6P54276 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh6P54276 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.46■□□□□ 0.71
Msh6P54276 Gm12428-201ENSMUST00000119844 727 ntBASIC19.46■□□□□ 0.71
Msh6P54276 Gm23547-201ENSMUST00000158210 271 ntBASIC19.46■□□□□ 0.71
Msh6P54276 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.46■□□□□ 0.71
Msh6P54276 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.46■□□□□ 0.71
Msh6P54276 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh6P54276 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Msh6P54276 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh6P54276 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.45■□□□□ 0.7
Msh6P54276 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.45■□□□□ 0.7
Msh6P54276 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms