Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pdx1P52946 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.28■□□□□ 0.04
Pdx1P52946 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Gm5682-201ENSMUST00000173402 505 ntBASIC15.28■□□□□ 0.04
Pdx1P52946 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pdx1P52946 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pdx1P52946 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pdx1P52946 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.28■□□□□ 0.04
Pdx1P52946 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pdx1P52946 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdx1P52946 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdx1P52946 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdx1P52946 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.27■□□□□ 0.04
Pdx1P52946 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Gm10060-201ENSMUST00000212002 111 ntBASIC15.27■□□□□ 0.04
Pdx1P52946 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.27■□□□□ 0.04
Pdx1P52946 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pdx1P52946 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pdx1P52946 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdx1P52946 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.26■□□□□ 0.03
Pdx1P52946 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Gm14722-201ENSMUST00000118943 689 ntBASIC15.26■□□□□ 0.03
Pdx1P52946 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pdx1P52946 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Gm6550-201ENSMUST00000187574 993 ntBASIC15.26■□□□□ 0.03
Pdx1P52946 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.26■□□□□ 0.03
Pdx1P52946 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdx1P52946 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.26■□□□□ 0.03
Pdx1P52946 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.26■□□□□ 0.03
Pdx1P52946 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdx1P52946 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.25■□□□□ 0.03
Pdx1P52946 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms