Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Mir7085-201ENSMUST00000184353 66 ntBASIC18.52■□□□□ 0.56
Nedd4P46935 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nedd4P46935 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nedd4P46935 Gm18049-201ENSMUST00000208909 581 ntBASIC18.52■□□□□ 0.56
Nedd4P46935 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.52■□□□□ 0.56
Nedd4P46935 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nedd4P46935 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nedd4P46935 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nedd4P46935 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nedd4P46935 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nedd4P46935 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Nedd4P46935 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Gm15321-201ENSMUST00000121290 288 ntBASIC18.51■□□□□ 0.55
Nedd4P46935 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Gm10499-201ENSMUST00000174094 934 ntBASIC18.51■□□□□ 0.55
Nedd4P46935 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.51■□□□□ 0.55
Nedd4P46935 Gm6745-201ENSMUST00000199216 526 ntBASIC18.51■□□□□ 0.55
Nedd4P46935 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nedd4P46935 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nedd4P46935 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Nedd4P46935 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.5■□□□□ 0.55
Nedd4P46935 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.5■□□□□ 0.55
Nedd4P46935 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.5■□□□□ 0.55
Nedd4P46935 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Nedd4P46935 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.5■□□□□ 0.55
Nedd4P46935 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nedd4P46935 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Nedd4P46935 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nedd4P46935 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.49■□□□□ 0.55
Nedd4P46935 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
Nedd4P46935 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nedd4P46935 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Nedd4P46935 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.49■□□□□ 0.55
Nedd4P46935 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.49■□□□□ 0.55
Nedd4P46935 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.49■□□□□ 0.55
Nedd4P46935 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Gm18766-201ENSMUST00000189811 808 ntBASIC18.49■□□□□ 0.55
Nedd4P46935 Gm6218-201ENSMUST00000219812 628 ntBASIC18.49■□□□□ 0.55
Nedd4P46935 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.49■□□□□ 0.55
Nedd4P46935 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nedd4P46935 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nedd4P46935 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nedd4P46935 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nedd4P46935 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nedd4P46935 Haglr-201ENSMUST00000100000 2085 ntBASIC18.48■□□□□ 0.55
Nedd4P46935 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.48■□□□□ 0.55
Nedd4P46935 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Gm44344-201ENSMUST00000200287 129 ntBASIC18.48■□□□□ 0.55
Nedd4P46935 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nedd4P46935 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nedd4P46935 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms