Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.29■□□□□ 0.2
HttP42859 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.29■□□□□ 0.2
HttP42859 Gm26461-201ENSMUST00000175064 290 ntBASIC16.29■□□□□ 0.2
HttP42859 Dupd1-202ENSMUST00000224735 548 ntBASIC16.29■□□□□ 0.2
HttP42859 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.29■□□□□ 0.2
HttP42859 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HttP42859 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.29■□□□□ 0.2
HttP42859 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.29■□□□□ 0.2
HttP42859 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HttP42859 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.28■□□□□ 0.2
HttP42859 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HttP42859 Gm9002-201ENSMUST00000178437 499 ntBASIC16.28■□□□□ 0.2
HttP42859 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HttP42859 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Gm28760-201ENSMUST00000185995 736 ntBASIC16.28■□□□□ 0.2
HttP42859 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
HttP42859 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.28■□□□□ 0.2
HttP42859 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.28■□□□□ 0.2
HttP42859 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HttP42859 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HttP42859 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.27■□□□□ 0.2
HttP42859 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HttP42859 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HttP42859 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.27■□□□□ 0.2
HttP42859 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.27■□□□□ 0.19
HttP42859 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.27■□□□□ 0.19
HttP42859 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.27■□□□□ 0.19
HttP42859 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HttP42859 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.27■□□□□ 0.19
HttP42859 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.27■□□□□ 0.19
HttP42859 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.27■□□□□ 0.19
HttP42859 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.27■□□□□ 0.19
HttP42859 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.27■□□□□ 0.19
HttP42859 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HttP42859 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.27■□□□□ 0.19
HttP42859 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.26■□□□□ 0.19
HttP42859 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.26■□□□□ 0.19
HttP42859 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.26■□□□□ 0.19
HttP42859 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.26■□□□□ 0.19
HttP42859 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.26■□□□□ 0.19
HttP42859 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.26■□□□□ 0.19
HttP42859 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HttP42859 Gm9522-201ENSMUST00000182394 926 ntBASIC16.26■□□□□ 0.19
HttP42859 Gm10766-202ENSMUST00000194123 606 ntBASIC16.26■□□□□ 0.19
HttP42859 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HttP42859 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HttP42859 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HttP42859 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.26■□□□□ 0.19
HttP42859 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.26■□□□□ 0.19
HttP42859 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.25■□□□□ 0.19
HttP42859 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.25■□□□□ 0.19
HttP42859 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.25■□□□□ 0.19
HttP42859 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HttP42859 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HttP42859 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms