Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Mmp13P33435 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.84■□□□□ 0.13
Mmp13P33435 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Mmp13P33435 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp13P33435 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Mmp13P33435 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mmp13P33435 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Mmp13P33435 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mmp13P33435 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mmp13P33435 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Mmp13P33435 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Gm27741-201ENSMUST00000185060 237 ntBASIC15.83■□□□□ 0.12
Mmp13P33435 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.83■□□□□ 0.12
Mmp13P33435 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp13P33435 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.82■□□□□ 0.12
Mmp13P33435 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Mmp13P33435 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp13P33435 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Mmp13P33435 Gm13312-201ENSMUST00000119631 718 ntBASIC15.82■□□□□ 0.12
Mmp13P33435 Gm12895-201ENSMUST00000122214 226 ntBASIC15.82■□□□□ 0.12
Mmp13P33435 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.82■□□□□ 0.12
Mmp13P33435 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.82■□□□□ 0.12
Mmp13P33435 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Mmp13P33435 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp13P33435 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp13P33435 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.81■□□□□ 0.12
Mmp13P33435 Gm7153-201ENSMUST00000117092 455 ntBASIC15.81■□□□□ 0.12
Mmp13P33435 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.81■□□□□ 0.12
Mmp13P33435 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.81■□□□□ 0.12
Mmp13P33435 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp13P33435 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Mmp13P33435 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Mmp13P33435 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.8■□□□□ 0.12
Mmp13P33435 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.8■□□□□ 0.12
Mmp13P33435 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.8■□□□□ 0.12
Mmp13P33435 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.8■□□□□ 0.12
Mmp13P33435 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.8■□□□□ 0.12
Mmp13P33435 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp13P33435 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms