Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd8P29595 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nedd8P29595 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd8P29595 Gm43183-201ENSMUST00000200632 547 ntBASIC14.35□□□□□ -0.11
Nedd8P29595 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.35□□□□□ -0.11
Nedd8P29595 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nedd8P29595 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Nedd8P29595 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd8P29595 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nedd8P29595 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.35□□□□□ -0.11
Nedd8P29595 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nedd8P29595 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nedd8P29595 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Gm12085-201ENSMUST00000119263 940 ntBASIC14.34□□□□□ -0.11
Nedd8P29595 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.34□□□□□ -0.11
Nedd8P29595 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.34□□□□□ -0.11
Nedd8P29595 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nedd8P29595 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd8P29595 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nedd8P29595 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd8P29595 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nedd8P29595 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd8P29595 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.33□□□□□ -0.12
Nedd8P29595 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nedd8P29595 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd8P29595 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nedd8P29595 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nedd8P29595 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nedd8P29595 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.32□□□□□ -0.12
Nedd8P29595 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Nedd8P29595 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms