Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.83□□□□□ -0.04
BdnfP21237 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
BdnfP21237 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.83□□□□□ -0.04
BdnfP21237 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
BdnfP21237 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 Gm6257-201ENSMUST00000163864 910 ntBASIC14.82□□□□□ -0.04
BdnfP21237 Gm29518-201ENSMUST00000190858 372 ntBASIC14.82□□□□□ -0.04
BdnfP21237 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
BdnfP21237 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BdnfP21237 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.82□□□□□ -0.04
BdnfP21237 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.82□□□□□ -0.04
BdnfP21237 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BdnfP21237 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
BdnfP21237 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.81□□□□□ -0.04
BdnfP21237 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
BdnfP21237 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.81□□□□□ -0.04
BdnfP21237 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BdnfP21237 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BdnfP21237 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.8□□□□□ -0.04
BdnfP21237 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BdnfP21237 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
BdnfP21237 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Gm6659-201ENSMUST00000174752 547 ntBASIC14.8□□□□□ -0.04
BdnfP21237 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.8□□□□□ -0.04
BdnfP21237 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
BdnfP21237 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.8□□□□□ -0.04
BdnfP21237 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BdnfP21237 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.8□□□□□ -0.04
BdnfP21237 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BdnfP21237 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BdnfP21237 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms