Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Gm9727-201ENSMUST00000161387 555 ntBASIC15.82■□□□□ 0.12
Rb1P13405 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Gm43575-201ENSMUST00000196420 516 ntBASIC15.82■□□□□ 0.12
Rb1P13405 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Rb1P13405 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rb1P13405 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rb1P13405 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.82■□□□□ 0.12
Rb1P13405 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rb1P13405 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Gm7222-201ENSMUST00000117512 906 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Gm4459-201ENSMUST00000118750 468 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rb1P13405 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Rb1P13405 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rb1P13405 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rb1P13405 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rb1P13405 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.81■□□□□ 0.12
Rb1P13405 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rb1P13405 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Rb1P13405 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rb1P13405 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Gm13036-201ENSMUST00000117799 748 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Gm8097-201ENSMUST00000117903 829 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Gm14494-201ENSMUST00000118786 435 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm11780-201ENSMUST00000136880 516 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm24513-201ENSMUST00000174964 138 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 Gm27397-201ENSMUST00000184997 107 ntBASIC15.8■□□□□ 0.12
Rb1P13405 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.8■□□□□ 0.12
Rb1P13405 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rb1P13405 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms