Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.67□□□□□ -0.7
Smim1P0C8K7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.67□□□□□ -0.7
Smim1P0C8K7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim1P0C8K7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.66□□□□□ -0.7
Smim1P0C8K7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim1P0C8K7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.65□□□□□ -0.7
Smim1P0C8K7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm6211-202ENSMUST00000167849 925 ntBASIC10.65□□□□□ -0.7
Smim1P0C8K7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm6365-201ENSMUST00000054711 744 ntBASIC10.65□□□□□ -0.7
Smim1P0C8K7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim1P0C8K7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smim1P0C8K7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.65□□□□□ -0.71
Smim1P0C8K7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Matn2-206ENSMUST00000228570 2798 ntBASIC10.65□□□□□ -0.71
Smim1P0C8K7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Smim1P0C8K7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smim1P0C8K7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smim1P0C8K7 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.64□□□□□ -0.71
Smim1P0C8K7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smim1P0C8K7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smim1P0C8K7 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.64□□□□□ -0.71
Smim1P0C8K7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smim1P0C8K7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms