Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.71■□□□□ 0.11
Rc3h2P0C090 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.71■□□□□ 0.11
Rc3h2P0C090 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h2P0C090 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h2P0C090 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h2P0C090 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h2P0C090 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h2P0C090 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.7■□□□□ 0.1
Rc3h2P0C090 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Gm18246-201ENSMUST00000221023 728 ntBASIC15.7■□□□□ 0.1
Rc3h2P0C090 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.7■□□□□ 0.1
Rc3h2P0C090 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h2P0C090 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.69■□□□□ 0.1
Rc3h2P0C090 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gm8318-201ENSMUST00000182954 872 ntBASIC15.69■□□□□ 0.1
Rc3h2P0C090 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Chchd1-203ENSMUST00000224633 557 ntBASIC15.69■□□□□ 0.1
Rc3h2P0C090 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.69■□□□□ 0.1
Rc3h2P0C090 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h2P0C090 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.68■□□□□ 0.1
Rc3h2P0C090 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Gm45747-201ENSMUST00000212203 999 ntBASIC15.68■□□□□ 0.1
Rc3h2P0C090 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.68■□□□□ 0.1
Rc3h2P0C090 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h2P0C090 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms