Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.94■□□□□ 0.78
Hoxc9P09633 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.94■□□□□ 0.78
Hoxc9P09633 Gm13223-201ENSMUST00000118609 747 ntBASIC19.94■□□□□ 0.78
Hoxc9P09633 Gm15483-201ENSMUST00000120338 456 ntBASIC19.94■□□□□ 0.78
Hoxc9P09633 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.93■□□□□ 0.78
Hoxc9P09633 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hoxc9P09633 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc9P09633 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.92■□□□□ 0.78
Hoxc9P09633 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.92■□□□□ 0.78
Hoxc9P09633 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.92■□□□□ 0.78
Hoxc9P09633 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Gm27618-201ENSMUST00000183671 60 ntBASIC19.92■□□□□ 0.78
Hoxc9P09633 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.92■□□□□ 0.78
Hoxc9P09633 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hoxc9P09633 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Hoxc9P09633 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc9P09633 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.91■□□□□ 0.78
Hoxc9P09633 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.91■□□□□ 0.78
Hoxc9P09633 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.91■□□□□ 0.78
Hoxc9P09633 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxc9P09633 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.91■□□□□ 0.78
Hoxc9P09633 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc9P09633 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hoxc9P09633 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.9■□□□□ 0.78
Hoxc9P09633 Gm38294-201ENSMUST00000192831 381 ntBASIC19.9■□□□□ 0.78
Hoxc9P09633 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc9P09633 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms