Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.93□□□□□ -0.66
Hbb-b1P02088 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Gm6139-201ENSMUST00000079261 882 ntBASIC10.93□□□□□ -0.66
Hbb-b1P02088 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.93□□□□□ -0.66
Hbb-b1P02088 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hbb-b1P02088 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.92□□□□□ -0.66
Hbb-b1P02088 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hbb-b1P02088 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm18958-201ENSMUST00000174258 762 ntBASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm43017-201ENSMUST00000198296 752 ntBASIC10.91□□□□□ -0.66
Hbb-b1P02088 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms