Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.83□□□□□ -0.2
Col5a1O88207 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.82□□□□□ -0.2
Col5a1O88207 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col5a1O88207 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Gm14719-201ENSMUST00000121891 340 ntBASIC13.82□□□□□ -0.2
Col5a1O88207 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.82□□□□□ -0.2
Col5a1O88207 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.82□□□□□ -0.2
Col5a1O88207 Gm16215-201ENSMUST00000161990 637 ntBASIC13.82□□□□□ -0.2
Col5a1O88207 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.82□□□□□ -0.2
Col5a1O88207 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col5a1O88207 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Gm6415-201ENSMUST00000118488 348 ntBASIC13.81□□□□□ -0.2
Col5a1O88207 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.81□□□□□ -0.2
Col5a1O88207 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.81□□□□□ -0.2
Col5a1O88207 Gm18057-201ENSMUST00000208220 503 ntBASIC13.81□□□□□ -0.2
Col5a1O88207 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.81□□□□□ -0.2
Col5a1O88207 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col5a1O88207 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Col5a1O88207 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.81□□□□□ -0.2
Col5a1O88207 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
Col5a1O88207 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.8□□□□□ -0.2
Col5a1O88207 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.8□□□□□ -0.2
Col5a1O88207 Mir7085-201ENSMUST00000184353 66 ntBASIC13.8□□□□□ -0.2
Col5a1O88207 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.8□□□□□ -0.2
Col5a1O88207 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col5a1O88207 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col5a1O88207 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.8□□□□□ -0.2
Col5a1O88207 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.8□□□□□ -0.2
Col5a1O88207 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.8□□□□□ -0.2
Col5a1O88207 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Gm9899-201ENSMUST00000065519 555 ntBASIC13.8□□□□□ -0.2
Col5a1O88207 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Col5a1O88207 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Col5a1O88207 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col5a1O88207 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col5a1O88207 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.79□□□□□ -0.2
Col5a1O88207 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.79□□□□□ -0.2
Col5a1O88207 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Gm2810-201ENSMUST00000118681 990 ntBASIC13.79□□□□□ -0.2
Col5a1O88207 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Col5a1O88207 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.79□□□□□ -0.2
Col5a1O88207 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col5a1O88207 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.79□□□□□ -0.2
Col5a1O88207 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.79□□□□□ -0.2
Col5a1O88207 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Col5a1O88207 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.79□□□□□ -0.2
Col5a1O88207 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col5a1O88207 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms