Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim1O70400 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim1O70400 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.24■□□□□ 0.03
Pdlim1O70400 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.24■□□□□ 0.03
Pdlim1O70400 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim1O70400 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim1O70400 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.23■□□□□ 0.03
Pdlim1O70400 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim1O70400 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim1O70400 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim1O70400 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim1O70400 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.22■□□□□ 0.03
Pdlim1O70400 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.22■□□□□ 0.03
Pdlim1O70400 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim1O70400 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.22■□□□□ 0.03
Pdlim1O70400 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Gm15590-201ENSMUST00000078419 552 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim1O70400 Grk6-207ENSMUST00000225925 2769 ntBASIC15.22■□□□□ 0.03
Pdlim1O70400 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim1O70400 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms