Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaO55042 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SncaO55042 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SncaO55042 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SncaO55042 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Gm9987-201ENSMUST00000069768 567 ntBASIC12.81□□□□□ -0.36
SncaO55042 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SncaO55042 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SncaO55042 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SncaO55042 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.8□□□□□ -0.36
SncaO55042 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
SncaO55042 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SncaO55042 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.8□□□□□ -0.36
SncaO55042 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.8□□□□□ -0.36
SncaO55042 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SncaO55042 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SncaO55042 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SncaO55042 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SncaO55042 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SncaO55042 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SncaO55042 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SncaO55042 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SncaO55042 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.79□□□□□ -0.36
SncaO55042 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.79□□□□□ -0.36
SncaO55042 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.79□□□□□ -0.36
SncaO55042 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SncaO55042 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SncaO55042 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SncaO55042 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SncaO55042 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.79□□□□□ -0.36
SncaO55042 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SncaO55042 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SncaO55042 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SncaO55042 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms