Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.04□□□□□ -0.32
Cxcl13O55038 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Gm26308-201ENSMUST00000157768 69 ntBASIC13.04□□□□□ -0.32
Cxcl13O55038 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Gm27301-201ENSMUST00000184012 127 ntBASIC13.04□□□□□ -0.32
Cxcl13O55038 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl13O55038 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl13O55038 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.03□□□□□ -0.32
Cxcl13O55038 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Gm45747-201ENSMUST00000212203 999 ntBASIC13.03□□□□□ -0.32
Cxcl13O55038 Thap2-203ENSMUST00000218989 527 ntBASIC13.03□□□□□ -0.32
Cxcl13O55038 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl13O55038 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl13O55038 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.02□□□□□ -0.32
Cxcl13O55038 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cxcl13O55038 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl13O55038 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl13O55038 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl13O55038 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cxcl13O55038 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl13O55038 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cxcl13O55038 Gm12008-201ENSMUST00000117791 755 ntBASIC13.02□□□□□ -0.33
Cxcl13O55038 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcl13O55038 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.02□□□□□ -0.33
Cxcl13O55038 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl13O55038 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.02□□□□□ -0.33
Cxcl13O55038 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl13O55038 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cxcl13O55038 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl13O55038 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms