Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.89□□□□□ -0.03
Cacna1bO55017 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Haglr-201ENSMUST00000100000 2085 ntBASIC14.89□□□□□ -0.03
Cacna1bO55017 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.88□□□□□ -0.03
Cacna1bO55017 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.88□□□□□ -0.03
Cacna1bO55017 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Cacna1bO55017 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.88□□□□□ -0.03
Cacna1bO55017 Gm10154-201ENSMUST00000084445 354 ntBASIC14.88□□□□□ -0.03
Cacna1bO55017 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1bO55017 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Gm27618-201ENSMUST00000183671 60 ntBASIC14.87□□□□□ -0.03
Cacna1bO55017 Gm27989-201ENSMUST00000184721 107 ntBASIC14.87□□□□□ -0.03
Cacna1bO55017 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1bO55017 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.87□□□□□ -0.03
Cacna1bO55017 Gm11543-201ENSMUST00000120758 370 ntBASIC14.87□□□□□ -0.03
Cacna1bO55017 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1bO55017 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Gm8410-201ENSMUST00000117225 605 ntBASIC14.86□□□□□ -0.03
Cacna1bO55017 Gm12490-201ENSMUST00000120255 560 ntBASIC14.86□□□□□ -0.03
Cacna1bO55017 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Gm27680-201ENSMUST00000184192 160 ntBASIC14.86□□□□□ -0.03
Cacna1bO55017 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.86□□□□□ -0.03
Cacna1bO55017 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms