Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Gm15920-201ENSMUST00000118998 402 ntBASIC16.9■□□□□ 0.3
Sptlc1O35704 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Gm7430-201ENSMUST00000193824 1144 ntBASIC16.9■□□□□ 0.3
Sptlc1O35704 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.9■□□□□ 0.3
Sptlc1O35704 Gm20553-201ENSMUST00000204205 844 ntBASIC16.9■□□□□ 0.3
Sptlc1O35704 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.9■□□□□ 0.3
Sptlc1O35704 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.9■□□□□ 0.3
Sptlc1O35704 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sptlc1O35704 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sptlc1O35704 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sptlc1O35704 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sptlc1O35704 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm13365-201ENSMUST00000121188 973 ntBASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm10576-201ENSMUST00000191927 825 ntBASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.89■□□□□ 0.29
Sptlc1O35704 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Sptlc1O35704 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sptlc1O35704 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.89■□□□□ 0.29
Sptlc1O35704 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.89■□□□□ 0.29
Sptlc1O35704 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sptlc1O35704 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sptlc1O35704 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sptlc1O35704 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Gm12813-201ENSMUST00000119615 902 ntBASIC16.88■□□□□ 0.29
Sptlc1O35704 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.88■□□□□ 0.29
Sptlc1O35704 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.88■□□□□ 0.29
Sptlc1O35704 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC16.88■□□□□ 0.29
Sptlc1O35704 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.88■□□□□ 0.29
Sptlc1O35704 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sptlc1O35704 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sptlc1O35704 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sptlc1O35704 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.87■□□□□ 0.29
Sptlc1O35704 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sptlc1O35704 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Gm14722-201ENSMUST00000118943 689 ntBASIC16.87■□□□□ 0.29
Sptlc1O35704 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC16.87■□□□□ 0.29
Sptlc1O35704 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.87■□□□□ 0.29
Sptlc1O35704 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 CT010486.3-201ENSMUST00000224555 811 ntBASIC16.87■□□□□ 0.29
Sptlc1O35704 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sptlc1O35704 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms