Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.25□□□□□ -0.45
Efnb3O35393 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.25□□□□□ -0.45
Efnb3O35393 Gm26039-201ENSMUST00000158152 144 ntBASIC12.25□□□□□ -0.45
Efnb3O35393 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.25□□□□□ -0.45
Efnb3O35393 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Efnb3O35393 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Efnb3O35393 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Efnb3O35393 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Efnb3O35393 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Efnb3O35393 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Efnb3O35393 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.24□□□□□ -0.45
Efnb3O35393 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Efnb3O35393 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.24□□□□□ -0.45
Efnb3O35393 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm10231-201ENSMUST00000181584 441 ntBASIC12.24□□□□□ -0.45
Efnb3O35393 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.24□□□□□ -0.45
Efnb3O35393 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm10175-202ENSMUST00000208752 441 ntBASIC12.24□□□□□ -0.45
Efnb3O35393 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.24□□□□□ -0.45
Efnb3O35393 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.24□□□□□ -0.45
Efnb3O35393 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Efnb3O35393 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.24□□□□□ -0.45
Efnb3O35393 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Efnb3O35393 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Efnb3O35393 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.23□□□□□ -0.45
Efnb3O35393 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Gm10052-201ENSMUST00000168019 960 ntBASIC12.23□□□□□ -0.45
Efnb3O35393 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.23□□□□□ -0.45
Efnb3O35393 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.23□□□□□ -0.45
Efnb3O35393 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Gm7729-201ENSMUST00000050143 801 ntBASIC12.23□□□□□ -0.45
Efnb3O35393 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Efnb3O35393 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms