Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Gm12106-201ENSMUST00000116006 1200 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Gm14140-201ENSMUST00000119999 995 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gfra3O35118 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.37□□□□□ -0.27
Gfra3O35118 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Gm37319-201ENSMUST00000193500 636 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.37□□□□□ -0.27
Gfra3O35118 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.37□□□□□ -0.27
Gfra3O35118 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gfra3O35118 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.37□□□□□ -0.27
Gfra3O35118 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Gfra3O35118 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gfra3O35118 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.36□□□□□ -0.27
Gfra3O35118 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.36□□□□□ -0.27
Gfra3O35118 Gm45167-201ENSMUST00000208007 322 ntBASIC13.36□□□□□ -0.27
Gfra3O35118 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.36□□□□□ -0.27
Gfra3O35118 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.36□□□□□ -0.27
Gfra3O35118 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gfra3O35118 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.36□□□□□ -0.27
Gfra3O35118 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.35□□□□□ -0.27
Gfra3O35118 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.35□□□□□ -0.27
Gfra3O35118 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.35□□□□□ -0.27
Gfra3O35118 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gfra3O35118 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gfra3O35118 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms