Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.46□□□□□ -0.09
Scarb2O35114 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.46□□□□□ -0.09
Scarb2O35114 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 Gm7367-201ENSMUST00000057611 492 ntBASIC14.46□□□□□ -0.09
Scarb2O35114 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Scarb2O35114 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scarb2O35114 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scarb2O35114 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scarb2O35114 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scarb2O35114 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scarb2O35114 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scarb2O35114 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scarb2O35114 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.45□□□□□ -0.1
Scarb2O35114 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.45□□□□□ -0.1
Scarb2O35114 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.45□□□□□ -0.1
Scarb2O35114 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scarb2O35114 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scarb2O35114 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.45□□□□□ -0.1
Scarb2O35114 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Scarb2O35114 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Scarb2O35114 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.44□□□□□ -0.1
Scarb2O35114 Gm27867-201ENSMUST00000184778 125 ntBASIC14.44□□□□□ -0.1
Scarb2O35114 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.44□□□□□ -0.1
Scarb2O35114 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.44□□□□□ -0.1
Scarb2O35114 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.44□□□□□ -0.1
Scarb2O35114 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.44□□□□□ -0.1
Scarb2O35114 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.44□□□□□ -0.1
Scarb2O35114 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scarb2O35114 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scarb2O35114 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scarb2O35114 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scarb2O35114 Gm15372-201ENSMUST00000120729 834 ntBASIC14.43□□□□□ -0.1
Scarb2O35114 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scarb2O35114 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Scarb2O35114 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Scarb2O35114 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.43□□□□□ -0.1
Scarb2O35114 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.43□□□□□ -0.1
Scarb2O35114 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scarb2O35114 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scarb2O35114 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms