Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.9■□□□□ 0.14
Trove2O08848 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Mir7071-201ENSMUST00000184847 69 ntBASIC15.9■□□□□ 0.14
Trove2O08848 Gm37722-201ENSMUST00000193757 208 ntBASIC15.9■□□□□ 0.14
Trove2O08848 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trove2O08848 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trove2O08848 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trove2O08848 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
Trove2O08848 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trove2O08848 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.89■□□□□ 0.13
Trove2O08848 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trove2O08848 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.89■□□□□ 0.13
Trove2O08848 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.89■□□□□ 0.13
Trove2O08848 Gm10231-201ENSMUST00000181584 441 ntBASIC15.89■□□□□ 0.13
Trove2O08848 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Gm10175-202ENSMUST00000208752 441 ntBASIC15.89■□□□□ 0.13
Trove2O08848 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trove2O08848 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Trove2O08848 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trove2O08848 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trove2O08848 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trove2O08848 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trove2O08848 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trove2O08848 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.88■□□□□ 0.13
Trove2O08848 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trove2O08848 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trove2O08848 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.88■□□□□ 0.13
Trove2O08848 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.88■□□□□ 0.13
Trove2O08848 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trove2O08848 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trove2O08848 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trove2O08848 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms