Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.74■□□□□ 0.27
Ube3aO08759 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3aO08759 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ube3aO08759 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.73■□□□□ 0.27
Ube3aO08759 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.73■□□□□ 0.27
Ube3aO08759 Gm21559-201ENSMUST00000220638 855 ntBASIC16.73■□□□□ 0.27
Ube3aO08759 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Gm8587-201ENSMUST00000076538 843 ntBASIC16.73■□□□□ 0.27
Ube3aO08759 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.73■□□□□ 0.27
Ube3aO08759 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3aO08759 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube3aO08759 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.72■□□□□ 0.27
Ube3aO08759 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ube3aO08759 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.72■□□□□ 0.27
Ube3aO08759 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.72■□□□□ 0.27
Ube3aO08759 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.72■□□□□ 0.27
Ube3aO08759 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Gm7367-201ENSMUST00000057611 492 ntBASIC16.72■□□□□ 0.27
Ube3aO08759 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.72■□□□□ 0.27
Ube3aO08759 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3aO08759 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.71■□□□□ 0.27
Ube3aO08759 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Ube3aO08759 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.71■□□□□ 0.27
Ube3aO08759 Gm23634-201ENSMUST00000175071 91 ntBASIC16.71■□□□□ 0.27
Ube3aO08759 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ube3aO08759 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3aO08759 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ube3aO08759 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.71■□□□□ 0.26
Ube3aO08759 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ube3aO08759 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ube3aO08759 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3aO08759 Gm22697-201ENSMUST00000175194 63 ntBASIC16.7■□□□□ 0.26
Ube3aO08759 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.7■□□□□ 0.26
Ube3aO08759 Gm18101-201ENSMUST00000215769 548 ntBASIC16.7■□□□□ 0.26
Ube3aO08759 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms